CDS

Accession Number TCMCG057C00882
gbkey CDS
Protein Id XP_018483207.1
Location complement(join(3638159..3638162,3638319..3641566))
Gene LOC108854193
GeneID 108854193
Organism Raphanus sativus

Protein

Length 1083aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018627705.1
Definition PREDICTED: leucine--tRNA ligase, cytoplasmic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03657        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01869        [VIEW IN KEGG]
EC 6.1.1.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004819        [VIEW IN EMBL-EBI]
GO:0004823        [VIEW IN EMBL-EBI]
GO:0004832        [VIEW IN EMBL-EBI]
GO:0005096        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006425        [VIEW IN EMBL-EBI]
GO:0006429        [VIEW IN EMBL-EBI]
GO:0006438        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006622        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008361        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010506        [VIEW IN EMBL-EBI]
GO:0010507        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017101        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030695        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032006        [VIEW IN EMBL-EBI]
GO:0032008        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034198        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043087        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043200        [VIEW IN EMBL-EBI]
GO:0043201        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043547        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060589        [VIEW IN EMBL-EBI]
GO:0061462        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071230        [VIEW IN EMBL-EBI]
GO:0071233        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071417        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902533        [VIEW IN EMBL-EBI]
GO:1903432        [VIEW IN EMBL-EBI]
GO:1904263        [VIEW IN EMBL-EBI]
GO:1990253        [VIEW IN EMBL-EBI]
GO:1990928        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCTGATTCGAAAAGCTTCGTGAGGAGAGATCGTCTTCTCGAGATCGAAGTAGCGGTACGAAAATGGTGGGAAGACGAGGGAGTGTTCTTAGCCGAGTCTCGCAAGGATCCTCCGAAGACGGGAGAGAAGTTCTTCGCGACTTTCCCTTTCCCTTATATGAACGGTTATCTACACATCGGACATGCCTTCTCGCTCTCCAAGGTTGACTTCGCCTCTGCGTACCATAGACTGAGAGGTGCTAACGTGCTCCTCCCGTTTGGCTTCCACTGCACTGGTATGCCGATCAAGGCTTCCGCTGATAAGCTCTCTCGCGAGATCCAGCGGTTTGGGAACCCTCCCGTGTTCACCGCTGAGGACGATGTCAAACAAGCTGTGGAGGAGGAGGAGAGTGATACGCCTGCTTTGCCGGGGCAGTTCAAGGGGAAGAAGTCGAAGGTTTCTGCGAAAGCTGGTGGACAGGTTTATCAGTGGGAGATTATGCGTAGCTTTGGTCTTACTGATAGTGAGATAGCGAAGTTTCAGGATCCTTATGAATGGTTGTACTTTTTCCCGCCATTGGCTGTTGAAGATCTCAGAGCGTATGGGTTGGGTTGTGACTGGAGAAGATCGTTCGTGACGACTGATGTGAATCCGTTCTTCGATAAGTTTGTGAGGTGGCAGATGAGGAAGTTGAAATCTATGGGGAAGATTGTGAAAGACCGTAGGTACACGATTTACTCGCCTTTGGATGGTCAGCCTTGTGCTGACCATGATCGTGCTACTGGTGAAGGTGTTCAGCCGCAGGAGTATACGCTTATTAAGATGGAAGTGGTGCAGCCGTTTCCTCTTAAGCTGGGTTCTTTGGAAGGGAAGAGAGTGTTTTTGGCTGCAGCTACTCTGAGGCCTGAGACAATGTATGGACAGACAAACGCATGGGTGTTGCCTGATGGAAAATACGGAGCTTATGAGATTAGTGAGACTGATGTCTTCATTCTAACTGAGAGAGCTGCGCTCAACCTTGCCTATCAGAACTTCTCAAAGATTCCTCAGAAGCCTTCCTGCTTGGTTGAGTTGACCGGGTATGATCTGATTGGACTCCCTTTGAGGTCTCCTCTGGCTGTGAACGAAATCATCTATGCGCTGCCCATGTTAACGATTCTGACAAACAAAGGTACTGGCATTGTCACCAGCGTGCCTAGTGATGCCCCTGATGATTACATGGCTCTGCATGACTTGTCTGCAAAGCCTGCTCTTCGAGCAAAGTATGGTGTGAAAGATGAGTGGGTGCCTTCTGAGATTGTACCGATTATTAACATTCCGGAGTTTGGGGATAAGGCTGCCGAGAAGGTCTGCTTGGATTTGAAAATTAAAAGTCAGAACGATAAGGACAAGCTTGCAGAGGCGAAGAGGCTGACGTACCTGAAAGGATTCACCGAAGGAACCATGCTTATTGGAGAGTTCGTTGGTAGAAAAGTCCAAGAAATCAAGCCTATTATCAAGACAAAGCTCATAGAGTCTGGCGACGCAATTCTATACAGTGAACCCGAGAAGCCTGTGATGTCAAGATCGGGTGATGAATGTGTTGTGGCCCTTACAGATCAGTGGTACTTAACGTACGGCGAATCAGAATGGCGTCAAATGGCTGAGGATTGCTTATCAAAGATGAATCTTTACTCTGAAGAAACAAGGCATGGCTTTGAGCACACTTTGAGCTGGCTCAATCAGTGGGCGTGCTCACGGTCTTTTGGTCTTGGAACGCGTATTCCTTGGGATGAACAGTTTCTTGTCGAATCCTTATCTGATTCCACTCTTTATATGGCTTATTATACAATTGCCCATATCTTTCACGACGGAGACATGTATAAAGGCAGTAAGTCTTTGATTAGCCCTCAACAGATGAATGATGATGTTTGGGAGTATCTCTTCTGCGATGGCCAGTACCCAAAGTCGTCTGACATTCCGGCTGATGTTTTAAGTAAGATGAAGCAGGAATTTGACTACTGGTACCCGCTAGATCTTCGAGTTTCAGGAAAGGATCTAATCCAGAATCATTTGACATTCTTCATCTACAACCACGCTGCCCTAATGGCGAGTCGTAACTGGCCTCGTGGTATCAGATGTAATGGTCACATTATGCTGAATTCTGAGAAAATGTCAAAGTCAACTGGGAATTTCAGAACACTGAAACAGGCTATTGAAGAATTCTCTGCCACTGCTACAAGGTTTTCTTTGGCTGATGCTGGTGATGGCGTTGACGATGCAAATTTTGTATTTGAAACTGCAAATGCTGCAATTTTGCGCCTGACAAAAGAGCTCACATGGATGGAAGAGGTTCTGGCTGCTGAATCTTCTTTGAGAACAGGCCCTCCGTCTACATATGCTGATAAAGTGTTTGAAAATGACATGAACATTGCTATCAGATTGACTGAAAAAGCCTACAAAGATTGTTTGTTCAGGGAGGCACTTAAGAATGGGTTTTACGACTTGCAAGCTGCTCGAGATGAGTATAGGCTCTCGTGTGGCACTGGCGGCATGAACCATGACTTGATAATGACCTTTATGGATGTGCAAACACGCCTCATTGAACCAATCTGTCCTCAGTTTGCAGAATATGTTTGGAGGAAACTTTTGAAGAAAGAAGGCTGTGTGGTAAAAGCAGGCTGGCCAGCATCAAATGAGCCAGATCTAGTTCTCAAGGGTGCTAACAAATATTTGCAAGATTCTATCGTCTTGATGAGAAAGCTTCTACAAAAGCAGCTCTTAGGTTCCAAGAAGGCTGCTAAAAAAGGTGCTCAAGTAACAGCAGTGGCAGACTCGAATCTGAAAGGCCTTGTATATGTGAATGAGCAATTTGACGGGTGGAGAGCTCACTGCCTCCAGATTCTTCAAAGCAAATTCGACCAACAGACCAATTGTTTTGCCCCTGATGCAGAGATACTTGCAGAACTAAGGGAGACATTGCAGAAGGATGGACAGGCAGAAAACTTCAAGCAGATTCAGAAGCTTTGCATGCCTTTCCTTAAATTCAAGAAGGACGAGGCAATAGCCATTGGCAGTCAGGCTTTAAATTTGAAGCTACCTTTTGGAGAGATGGAAGTTCTTAAGAGTAATGTGGACTTGATCAAGCGGCAAGTTGGTCTTGAAGAAGTTGAAATCTATTCAGCAAGTGACCCTAATGATGTGGCTAAAGCTGGTCCATATGCTTCACTCCTGACGCAGAATCCTCCATCTCCAGGCAGTCCAACCGCCATCTTTGTTAACAGGTAA
Protein:  
MASDSKSFVRRDRLLEIEVAVRKWWEDEGVFLAESRKDPPKTGEKFFATFPFPYMNGYLHIGHAFSLSKVDFASAYHRLRGANVLLPFGFHCTGMPIKASADKLSREIQRFGNPPVFTAEDDVKQAVEEEESDTPALPGQFKGKKSKVSAKAGGQVYQWEIMRSFGLTDSEIAKFQDPYEWLYFFPPLAVEDLRAYGLGCDWRRSFVTTDVNPFFDKFVRWQMRKLKSMGKIVKDRRYTIYSPLDGQPCADHDRATGEGVQPQEYTLIKMEVVQPFPLKLGSLEGKRVFLAAATLRPETMYGQTNAWVLPDGKYGAYEISETDVFILTERAALNLAYQNFSKIPQKPSCLVELTGYDLIGLPLRSPLAVNEIIYALPMLTILTNKGTGIVTSVPSDAPDDYMALHDLSAKPALRAKYGVKDEWVPSEIVPIINIPEFGDKAAEKVCLDLKIKSQNDKDKLAEAKRLTYLKGFTEGTMLIGEFVGRKVQEIKPIIKTKLIESGDAILYSEPEKPVMSRSGDECVVALTDQWYLTYGESEWRQMAEDCLSKMNLYSEETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEQFLVESLSDSTLYMAYYTIAHIFHDGDMYKGSKSLISPQQMNDDVWEYLFCDGQYPKSSDIPADVLSKMKQEFDYWYPLDLRVSGKDLIQNHLTFFIYNHAALMASRNWPRGIRCNGHIMLNSEKMSKSTGNFRTLKQAIEEFSATATRFSLADAGDGVDDANFVFETANAAILRLTKELTWMEEVLAAESSLRTGPPSTYADKVFENDMNIAIRLTEKAYKDCLFREALKNGFYDLQAARDEYRLSCGTGGMNHDLIMTFMDVQTRLIEPICPQFAEYVWRKLLKKEGCVVKAGWPASNEPDLVLKGANKYLQDSIVLMRKLLQKQLLGSKKAAKKGAQVTAVADSNLKGLVYVNEQFDGWRAHCLQILQSKFDQQTNCFAPDAEILAELRETLQKDGQAENFKQIQKLCMPFLKFKKDEAIAIGSQALNLKLPFGEMEVLKSNVDLIKRQVGLEEVEIYSASDPNDVAKAGPYASLLTQNPPSPGSPTAIFVNR